Last updated on 2025-09-09 08:49:36 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.11 | 242.53 | 256.64 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.56 | 216.68 | 227.24 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 312.36 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 354.79 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.82 | 240.60 | 256.42 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.24 | 305.48 | 319.72 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 168.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 189.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 178.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 233.00 | 256.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/115s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.557, system: 0.061, elapsed: 2.022 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.753, system: 0.114, elapsed: 9.586 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.014, elapsed: 0.206 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.781, system: 0.222, elapsed: 4.636 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.004, elapsed: 0.172 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.961, system: 0.438, elapsed: 17.478 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.490, system: 0.044, elapsed: 1.659 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.106, system: 0.219, elapsed: 12.428 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.015, elapsed: 0.357 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.547, system: 0.171, elapsed: 4.405 seconds]
Computing values for grid cells...
... done. [user: 0.155, system: 0.004, elapsed: 0.167 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.006, system: 0.476, elapsed: 19.766 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.601, system: 0.056, elapsed: 1.956 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.218, system: 0.186, elapsed: 21.624 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.546 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.846, system: 0.219, elapsed: 9.700 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.005, elapsed: 0.319 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.191, system: 0.236, elapsed: 1.442 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.824, system: 0.743, elapsed: 37.044 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.532, system: 0.043, elapsed: 2.272 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.006, system: 0.047, elapsed: 8.667 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.231 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.700, system: 0.185, elapsed: 5.275 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.002, elapsed: 0.162 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.679, system: 0.706, elapsed: 15.651 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.912, system: 1.033, elapsed: 33.234 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [81s/122s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.545, system: 0.051, elapsed: 1.702 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.254, system: 0.287, elapsed: 14.662 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.017, elapsed: 0.361 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.678, system: 0.262, elapsed: 5.351 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.008, elapsed: 0.221 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.358, system: 0.648, elapsed: 23.026 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.717, system: 0.076, elapsed: 2.714 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.239, system: 0.243, elapsed: 15.352 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.016, elapsed: 0.359 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.721, system: 0.221, elapsed: 6.645 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.009, elapsed: 0.313 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.577, system: 0.599, elapsed: 26.393 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.659, system: 0.056, elapsed: 2.846 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.134, system: 0.258, elapsed: 13.090 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.015, elapsed: 0.226 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.691, system: 0.265, elapsed: 6.240 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.022, elapsed: 0.348 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.046, system: 0.239, elapsed: 1.092 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.518, system: 0.897, elapsed: 24.854 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.508, system: 0.038, elapsed: 2.601 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.955, system: 0.087, elapsed: 13.748 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.316 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.586, system: 0.173, elapsed: 6.058 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.006, elapsed: 0.251 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.131, system: 0.561, elapsed: 16.521 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.160, system: 0.905, elapsed: 40.637 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64