CRAN Package Check Results for Package deepdep

Last updated on 2025-07-23 20:50:38 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.4.3 2.47 43.43 45.90 ERROR
r-devel-linux-x86_64-debian-gcc 0.4.3 2.17 32.82 34.99 ERROR
r-devel-linux-x86_64-fedora-clang 0.4.3 56.82 ERROR
r-devel-linux-x86_64-fedora-gcc 0.4.3 69.46 ERROR
r-devel-windows-x86_64 0.4.3 4.00 149.00 153.00 ERROR
r-patched-linux-x86_64 0.4.3 2.83 140.46 143.29 OK
r-release-linux-x86_64 0.4.3 2.58 140.58 143.16 OK
r-release-macos-arm64 0.4.3 88.00 OK
r-release-macos-x86_64 0.4.3 174.00 OK
r-release-windows-x86_64 0.4.3 4.00 149.00 153.00 OK
r-oldrel-macos-arm64 0.4.3 74.00 OK
r-oldrel-macos-x86_64 0.4.3 115.00 OK
r-oldrel-windows-x86_64 0.4.3 5.00 206.00 211.00 OK

Check Details

Version: 0.4.3
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [12s/18s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(deepdep) > > test_check("deepdep") [ FAIL 4 | WARN 0 | SKIP 1 | PASS 21 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-plot_downloads.R:8:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-deepdep.R:33:5'): obtaining Bioc dependencies returns objects of correct types ── Error in `value[[3L]](cond)`: incorrect number of dimensions Backtrace: ▆ 1. ├─vcr::use_cassette(...) at test-deepdep.R:32:3 2. │ └─cassette$call_block(...) 3. └─deepdep (local) deepdep_wrapped(...) at test-deepdep.R:33:5 4. └─base::tryCatch(...) at test-deepdep.R:3:3 5. └─base (local) tryCatchList(expr, classes, parentenv, handlers) 6. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 7. └─value[[3L]](cond) ── Error ('test-deepdep.R:55:5'): packages with no dependencies return empty deepdep object in result ── Error: parse error: premature EOF (right here) ------^ Backtrace: ▆ 1. ├─vcr::use_cassette(...) at test-deepdep.R:54:3 2. │ └─cassette$call_block(...) 3. └─deepdep::deepdep("rlang") at test-deepdep.R:55:5 4. └─deepdep::deepdep(...) at tests/testthat/setup-deepdep.R:6:3 5. └─deepdep::get_dependencies(package, downloads, bioc, local, dependency_type) 6. └─deepdep::get_description(package, bioc, local) 7. └─deepdep:::get_desc_cached(package, "CRAN") 8. └─deepdep:::append_desc_CRAN(package, descs) 9. └─deepdep:::DB(package) 10. └─jsonlite::prettify(ret) 11. └─jsonlite:::reformat(txt, TRUE, indent_string) 12. └─jsonlite:::stop(out[[2]], call. = FALSE) ── Error ('test-deepdep_declutter.R:2:3'): (code run outside of `test_that()`) ── Error: parse error: premature EOF (right here) ------^ Backtrace: ▆ 1. ├─vcr::use_cassette(...) at test-deepdep_declutter.R:1:1 2. │ └─cassette$call_block(...) 3. └─deepdep::deepdep("R6", depth = 3, dependency_type = "all") at test-deepdep_declutter.R:2:3 4. └─deepdep::deepdep(...) at tests/testthat/setup-deepdep.R:6:3 5. └─deepdep::get_dependencies(package, downloads, bioc, local, dependency_type) 6. └─deepdep::get_description(package, bioc, local) 7. └─deepdep:::get_desc_cached(package, "CRAN") 8. └─deepdep:::append_desc_CRAN(package, descs) 9. └─deepdep:::DB(package) 10. └─jsonlite::prettify(ret) 11. └─jsonlite:::reformat(txt, TRUE, indent_string) 12. └─jsonlite:::stop(out[[2]], call. = FALSE) ── Error ('test-plot.R:15:3'): (code run outside of `test_that()`) ───────────── Error: parse error: premature EOF (right here) ------^ Backtrace: ▆ 1. ├─vcr::use_cassette(...) at test-plot.R:14:1 2. │ └─cassette$call_block(...) 3. └─deepdep::deepdep("shiny", depth = 2) at test-plot.R:15:3 4. └─deepdep::deepdep(...) at tests/testthat/setup-deepdep.R:6:3 5. └─deepdep::get_dependencies(package, downloads, bioc, local, dependency_type) 6. └─deepdep::get_description(package, bioc, local) 7. └─deepdep:::get_desc_cached(package, "CRAN") 8. └─deepdep:::append_desc_CRAN(package, descs) 9. └─deepdep:::DB(package) 10. └─jsonlite::prettify(ret) 11. └─jsonlite:::reformat(txt, TRUE, indent_string) 12. └─jsonlite:::stop(out[[2]], call. = FALSE) [ FAIL 4 | WARN 0 | SKIP 1 | PASS 21 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.4.3
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [7s/11s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(deepdep) > > test_check("deepdep") [ FAIL 4 | WARN 0 | SKIP 1 | PASS 21 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-plot_downloads.R:8:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-deepdep.R:33:5'): obtaining Bioc dependencies returns objects of correct types ── Error in `value[[3L]](cond)`: incorrect number of dimensions Backtrace: ▆ 1. ├─vcr::use_cassette(...) at test-deepdep.R:32:3 2. │ └─cassette$call_block(...) 3. └─deepdep (local) deepdep_wrapped(...) at test-deepdep.R:33:5 4. └─base::tryCatch(...) at test-deepdep.R:3:3 5. └─base (local) tryCatchList(expr, classes, parentenv, handlers) 6. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 7. └─value[[3L]](cond) ── Error ('test-deepdep.R:55:5'): packages with no dependencies return empty deepdep object in result ── Error: parse error: premature EOF (right here) ------^ Backtrace: ▆ 1. ├─vcr::use_cassette(...) at test-deepdep.R:54:3 2. │ └─cassette$call_block(...) 3. └─deepdep::deepdep("rlang") at test-deepdep.R:55:5 4. └─deepdep::deepdep(...) at tests/testthat/setup-deepdep.R:6:3 5. └─deepdep::get_dependencies(package, downloads, bioc, local, dependency_type) 6. └─deepdep::get_description(package, bioc, local) 7. └─deepdep:::get_desc_cached(package, "CRAN") 8. └─deepdep:::append_desc_CRAN(package, descs) 9. └─deepdep:::DB(package) 10. └─jsonlite::prettify(ret) 11. └─jsonlite:::reformat(txt, TRUE, indent_string) 12. └─jsonlite:::stop(out[[2]], call. = FALSE) ── Error ('test-deepdep_declutter.R:2:3'): (code run outside of `test_that()`) ── Error: parse error: premature EOF (right here) ------^ Backtrace: ▆ 1. ├─vcr::use_cassette(...) at test-deepdep_declutter.R:1:1 2. │ └─cassette$call_block(...) 3. └─deepdep::deepdep("R6", depth = 3, dependency_type = "all") at test-deepdep_declutter.R:2:3 4. └─deepdep::deepdep(...) at tests/testthat/setup-deepdep.R:6:3 5. └─deepdep::get_dependencies(package, downloads, bioc, local, dependency_type) 6. └─deepdep::get_description(package, bioc, local) 7. └─deepdep:::get_desc_cached(package, "CRAN") 8. └─deepdep:::append_desc_CRAN(package, descs) 9. └─deepdep:::DB(package) 10. └─jsonlite::prettify(ret) 11. └─jsonlite:::reformat(txt, TRUE, indent_string) 12. └─jsonlite:::stop(out[[2]], call. = FALSE) ── Error ('test-plot.R:15:3'): (code run outside of `test_that()`) ───────────── Error: parse error: premature EOF (right here) ------^ Backtrace: ▆ 1. ├─vcr::use_cassette(...) at test-plot.R:14:1 2. │ └─cassette$call_block(...) 3. └─deepdep::deepdep("shiny", depth = 2) at test-plot.R:15:3 4. └─deepdep::deepdep(...) at tests/testthat/setup-deepdep.R:6:3 5. └─deepdep::get_dependencies(package, downloads, bioc, local, dependency_type) 6. └─deepdep::get_description(package, bioc, local) 7. └─deepdep:::get_desc_cached(package, "CRAN") 8. └─deepdep:::append_desc_CRAN(package, descs) 9. └─deepdep:::DB(package) 10. └─jsonlite::prettify(ret) 11. └─jsonlite:::reformat(txt, TRUE, indent_string) 12. └─jsonlite:::stop(out[[2]], call. = FALSE) [ FAIL 4 | WARN 0 | SKIP 1 | PASS 21 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.4.3
Check: tests
Result: ERROR Running ‘spelling.R’ Running ‘testthat.R’ Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(deepdep) > > test_check("deepdep") Error in `FUN()`: ! In path: "/data/gannet/ripley/R/packages/tests-clang/deepdep.Rcheck/tests/testthat/setup-vcr.R" Caused by error in `vcr::vcr_configure()`: ! unused argument (verbose_errors = TRUE) Backtrace: ▆ 1. ├─testthat::test_check("deepdep") 2. │ └─testthat::test_dir(...) 3. │ └─testthat:::test_files(...) 4. │ └─testthat:::test_files_serial(...) 5. │ └─testthat:::test_files_setup_state(...) 6. │ └─testthat::source_test_setup(".", env) 7. │ └─testthat::source_dir(path, "^setup.*\\.[rR]$", env = env, wrap = FALSE) 8. │ └─base::lapply(...) 9. │ └─testthat (local) FUN(X[[i]], ...) 10. │ └─testthat::source_file(path, env = env, chdir = chdir, wrap = wrap) 11. │ ├─base::withCallingHandlers(...) 12. │ └─base::eval(exprs, env) 13. │ └─base::eval(exprs, env) 14. └─base::.handleSimpleError(...) at tests/testthat/setup-vcr.R:3:3 15. └─testthat (local) h(simpleError(msg, call)) 16. └─rlang::abort(...) Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.4.3
Check: tests
Result: ERROR Running ‘spelling.R’ Running ‘testthat.R’ Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(deepdep) > > test_check("deepdep") Error in `FUN()`: ! In path: "/data/gannet/ripley/R/packages/tests-devel/deepdep.Rcheck/tests/testthat/setup-vcr.R" Caused by error in `vcr::vcr_configure()`: ! unused argument (verbose_errors = TRUE) Backtrace: ▆ 1. ├─testthat::test_check("deepdep") 2. │ └─testthat::test_dir(...) 3. │ └─testthat:::test_files(...) 4. │ └─testthat:::test_files_serial(...) 5. │ └─testthat:::test_files_setup_state(...) 6. │ └─testthat::source_test_setup(".", env) 7. │ └─testthat::source_dir(path, "^setup.*\\.[rR]$", env = env, wrap = FALSE) 8. │ └─base::lapply(...) 9. │ └─testthat (local) FUN(X[[i]], ...) 10. │ └─testthat::source_file(path, env = env, chdir = chdir, wrap = wrap) 11. │ ├─base::withCallingHandlers(...) 12. │ └─base::eval(exprs, env) 13. │ └─base::eval(exprs, env) 14. └─base::.handleSimpleError(...) at tests/testthat/setup-vcr.R:3:3 15. └─testthat (local) h(simpleError(msg, call)) 16. └─rlang::abort(...) Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.4.3
Check: tests
Result: ERROR Running 'spelling.R' [0s] Running 'testthat.R' [12s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(deepdep) > > test_check("deepdep") [ FAIL 4 | WARN 0 | SKIP 1 | PASS 21 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-plot_downloads.R:8:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-deepdep.R:33:5'): obtaining Bioc dependencies returns objects of correct types ── Error in `value[[3L]](cond)`: incorrect number of dimensions Backtrace: ▆ 1. ├─vcr::use_cassette(...) at test-deepdep.R:32:3 2. │ └─cassette$call_block(...) 3. └─deepdep (local) deepdep_wrapped(...) at test-deepdep.R:33:5 4. └─base::tryCatch(...) at test-deepdep.R:3:3 5. └─base (local) tryCatchList(expr, classes, parentenv, handlers) 6. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 7. └─value[[3L]](cond) ── Error ('test-deepdep.R:55:5'): packages with no dependencies return empty deepdep object in result ── Error: parse error: premature EOF (right here) ------^ Backtrace: ▆ 1. ├─vcr::use_cassette(...) at test-deepdep.R:54:3 2. │ └─cassette$call_block(...) 3. └─deepdep::deepdep("rlang") at test-deepdep.R:55:5 4. └─deepdep::deepdep(...) at D:\RCompile\CRANpkg\local\4.6\deepdep.Rcheck\tests\testthat\setup-deepdep.R:6:3 5. └─deepdep::get_dependencies(package, downloads, bioc, local, dependency_type) 6. └─deepdep::get_description(package, bioc, local) 7. └─deepdep:::get_desc_cached(package, "CRAN") 8. └─deepdep:::append_desc_CRAN(package, descs) 9. └─deepdep:::DB(package) 10. └─jsonlite::prettify(ret) 11. └─jsonlite:::reformat(txt, TRUE, indent_string) 12. └─jsonlite:::stop(out[[2]], call. = FALSE) ── Error ('test-deepdep_declutter.R:2:3'): (code run outside of `test_that()`) ── Error: parse error: premature EOF (right here) ------^ Backtrace: ▆ 1. ├─vcr::use_cassette(...) at test-deepdep_declutter.R:1:1 2. │ └─cassette$call_block(...) 3. └─deepdep::deepdep("R6", depth = 3, dependency_type = "all") at test-deepdep_declutter.R:2:3 4. └─deepdep::deepdep(...) at D:\RCompile\CRANpkg\local\4.6\deepdep.Rcheck\tests\testthat\setup-deepdep.R:6:3 5. └─deepdep::get_dependencies(package, downloads, bioc, local, dependency_type) 6. └─deepdep::get_description(package, bioc, local) 7. └─deepdep:::get_desc_cached(package, "CRAN") 8. └─deepdep:::append_desc_CRAN(package, descs) 9. └─deepdep:::DB(package) 10. └─jsonlite::prettify(ret) 11. └─jsonlite:::reformat(txt, TRUE, indent_string) 12. └─jsonlite:::stop(out[[2]], call. = FALSE) ── Error ('test-plot.R:15:3'): (code run outside of `test_that()`) ───────────── Error: parse error: premature EOF (right here) ------^ Backtrace: ▆ 1. ├─vcr::use_cassette(...) at test-plot.R:14:1 2. │ └─cassette$call_block(...) 3. └─deepdep::deepdep("shiny", depth = 2) at test-plot.R:15:3 4. └─deepdep::deepdep(...) at D:\RCompile\CRANpkg\local\4.6\deepdep.Rcheck\tests\testthat\setup-deepdep.R:6:3 5. └─deepdep::get_dependencies(package, downloads, bioc, local, dependency_type) 6. └─deepdep::get_description(package, bioc, local) 7. └─deepdep:::get_desc_cached(package, "CRAN") 8. └─deepdep:::append_desc_CRAN(package, descs) 9. └─deepdep:::DB(package) 10. └─jsonlite::prettify(ret) 11. └─jsonlite:::reformat(txt, TRUE, indent_string) 12. └─jsonlite:::stop(out[[2]], call. = FALSE) [ FAIL 4 | WARN 0 | SKIP 1 | PASS 21 ] Error: Test failures Execution halted Flavor: r-devel-windows-x86_64