ddpcr-package	ddpcr-package
%>%	grapes-greater-than-grapes
%btwn%	grapes-btwn-grapes
analysis_complete	analysis_complete
analyze	analyze
bind_df_ends	bind_df_ends
calculate_concentration	calculate_concentration
calculate_concentration_single	calculate_concentration_single
calculate_negative_freqs	calculate_negative_freqs
calculate_neg_freq_single	calculate_neg_freq_single
calc_negative_freq_simple	calc_negative_freq_simple
capitalize	capitalize
cat0	cat0
check_step	check_step
classify_droplets	classify_droplets
classify_droplets.pnpp_experiment	classify_droplets.pnpp_experiment
classify_droplets_single	classify_droplets_single
classify_droplets_single.pnpp_experiment	classify_droplets_single.pnpp_experiment
classify_thresholds	classify_thresholds
cluster	cluster
clusters	clusters
cluster_name	cluster_name
col_to_num	col_to_num
custom_thresholds	custom_thresholds
ddpcr	ddpcr-package
ddpcr_plate	ddpcr_plate
define_clusters	define_clusters
define_clusters.custom_thresholds	define_clusters.custom_thresholds
define_clusters.ddpcr_plate	define_clusters.ddpcr_plate
define_clusters.pnpp_experiment	define_clusters.pnpp_experiment
define_params	define_params
define_params.custom_thresholds	define_params.custom_thresholds
define_params.ddpcr_plate	define_params.ddpcr_plate
define_params.fam_positive_pnpp	define_params.fam_positive_pnpp
define_params.hex_positive_pnpp	define_params.hex_positive_pnpp
define_params.pnpp_experiment	define_params.pnpp_experiment
define_params.wildtype_mutant_pnpp	define_params.wildtype_mutant_pnpp
define_steps	define_steps
define_steps.custom_thresholds	define_steps.custom_thresholds
define_steps.ddpcr_plate	define_steps.ddpcr_plate
define_steps.pnpp_experiment	define_steps.pnpp_experiment
diff.point2d	diff.point2d
err_msg	err_msg
fam_positive_pnpp	fam_positive_pnpp
get_col	get_col
get_empty_cutoff	get_empty_cutoff
get_empty_cutoff.ddpcr_plate	get_empty_cutoff.ddpcr_plate
get_empty_cutoff.pnpp_experiment	get_empty_cutoff.pnpp_experiment
get_filled_border	get_filled_border
get_filled_drops	get_filled_drops
get_outlier_cutoff	get_outlier_cutoff
get_outlier_cutoff.ddpcr_plate	get_outlier_cutoff.ddpcr_plate
get_row	get_row
get_single_well	get_single_well
get_wells_btwn	get_wells_btwn
has_signif_negative_cluster	has_signif_negative_cluster
has_step	has_step
hex_positive_pnpp	hex_positive_pnpp
is_dir	is_dir
is_dirty	is_dirty
is_empty_plate	is_empty_plate
is_file	is_file
is_range	is_range
is_well_success	is_well_success
is_well_success.ddpcr_plate	is_well_success.ddpcr_plate
is_well_success.pnpp_experiment	is_well_success.pnpp_experiment
launch	launch
load_plate	load_plate
local_maxima	local_maxima
local_minima	local_minima
lol_to_df	lol_to_df
mark_clusters	mark_clusters
merge_dfs_overwrite_col	merge_dfs_overwrite_col
meta_var_name	meta_var_name
move_back	move_back
move_front	move_front
msg	msg
name	name
name<-	name
named_vec_to_df	named_vec_to_df
negative_name	positive_name
negative_name<-	positive_name
new_plate	new_plate
next_step	next_step
normalize_to_rds	normalize_to_rds
num_to_col	num_to_col
num_to_row	num_to_row
other_dim	other_dim
params	params
params<-	params
parent_plate_type	parent_plate_type
parent_plate_type.ddpcr_plate	parent_plate_type.ddpcr_plate
parent_plate_type.default	parent_plate_type.default
parent_plate_type.fam_positive_pnpp	parent_plate_type.fam_positive_pnpp
parent_plate_type.hex_positive_pnpp	parent_plate_type.hex_positive_pnpp
parent_plate_type.wildtype_mutant_pnpp	parent_plate_type.wildtype_mutant_pnpp
plate_data	plate_data
plate_data<-	plate_data-set
plate_meta	plate_meta
plate_meta<-	plate_meta-set
plate_types	plate_types
plot.custom_thresholds	plot.custom_thresholds
plot.ddpcr_plate	plot.ddpcr_plate
plot.pnpp_experiment	plot.pnpp_experiment
plot.wildtype_mutant_pnpp	plot.wildtype_mutant_pnpp
pnpp_experiment	pnpp_experiment
point2d	point2d
positive_dim	positive_dim
positive_dim<-	positive_dim
positive_dim_var	positive_dim_var
positive_name	positive_name
positive_name<-	positive_name
print.ddpcr_plate	print.ddpcr_plate
quiet	quiet
range_list_to_vec	range_list_to_vec
range_to_endpoints	range_to_endpoints
range_to_seq	range_to_seq
reclassify_droplets	reclassify_droplets
reclassify_droplets.pnpp_experiment	reclassify_droplets.pnpp_experiment
reclassify_droplets_single	reclassify_droplets_single
reclassify_droplets_single.pnpp_experiment	reclassify_droplets_single.pnpp_experiment
remove_empty	remove_empty
remove_empty.ddpcr_plate	remove_empty.ddpcr_plate
remove_empty.pnpp_experiment	remove_empty.pnpp_experiment
remove_failures	remove_failures
remove_failures.ddpcr_plate	remove_failures.ddpcr_plate
remove_outliers	remove_outliers
remove_outliers.ddpcr_plate	remove_outliers.ddpcr_plate
reset	reset
row_to_num	row_to_num
sample_data	sample_data
sample_data_dir	sample_data
sample_data_file	sample_data
sample_plate	sample_data
sample_results_file	sample_data
save_plate	save_plate
set_default_params	set_default_params
set_thresholds	thresholds
status	status
status<-	status
step	step
steps	steps
step_begin	step_begin
step_end	step_end
step_name	step_name
subset.ddpcr_plate	subset.ddpcr_plate
thresholds	thresholds
thresholds<-	thresholds
type	type
unanalyzed_clusters	unanalyzed_clusters
variable_dim	variable_dim
variable_dim<-	variable_dim
variable_dim_var	variable_dim_var
warn_msg	warn_msg
wells_failed	wells_success
wells_mutant	wells_mutant
wells_negative	wells_negative
wells_positive	wells_positive
wells_success	wells_success
wells_used	wells_used
wells_wildtype	wells_wildtype
WELL_ID_REGEX	WELL_ID_REGEX
well_info	well_info
wildtype_mutant_pnpp	wildtype_mutant_pnpp
x_threshold	x_threshold
x_threshold<-	x_threshold
x_var	x_var
x_var<-	x_var
y_threshold	y_threshold
y_threshold<-	y_threshold
y_var	x_var
y_var<-	x_var
