acc                     Compute prediction accuracy for a quantitative
                        or binary trait
adjStat                 Adjustment of marker summary statistics using
                        clumping and thresholding
gbayes                  Bayesian linear regression models
getG                    Get elements from genotype matrix stored in
                        PLINK bedfiles
gfilter                 Filter genetic marker data based on different
                        quality measures
glma                    Single marker association analysis using linear
                        models or linear mixed models
gmap                    Finemapping using Bayesian Linear Regression
                        Models
gprep                   Prepare genotype data for all statistical
                        analyses
greml                   Genomic rescticted maximum likelihood (GREML)
                        analysis
grm                     Computing the genomic relationship matrix (GRM)
gscore                  Genomic scoring based on single marker summary
                        statistics
gsea                    Gene set enrichment analysis
gsim                    Genomic simulation
gsolve                  Solve linear mixed model equations
ldsc                    LD score regression
magma                   Bayesian Multi-marker Analysis of Genomic
                        Annotation (Bayesian MAGMA)
mtadj                   Adjustment of marker effects using correlated
                        trait information
pops                    Bayesian Polygenic Prioritisation Scoring
                        (Bayesian POPS)
vegas                   Perform VEGAS Gene-Based Association Analysis
