Package: omicsTools
Title: Omics Data Process Toolbox
Version: 1.0.5
Date: 2023-06-29
Authors@R: c(
    person("Yaoxiang", "Li", , "liyaoxiang@outlook.com", role = c("cre", "aut"),
           comment = c(ORCID = "0000-0001-9200-1016")),
    person("Zihao", "Zhang", , "zz351@georgetown.edu", role = "aut"),
    person("Meth", "Jayatilake", , "mmj61@georgetown.edu", role = "aut"),
    person("Amrita", "Cheema", , "akc27@georgetown.edu", role = "aut",
           comment = c(ORCID = "0000-0003-4877-7583"))
  )
Description: Processing and analyzing omics data from genomics, transcriptomics, proteomics, and metabolomics platforms. It provides functions for preprocessing, normalization, visualization, and statistical analysis, as well as machine learning algorithms for predictive modeling. 'omicsTools' is an essential tool for researchers working with high-throughput omics data in fields such as biology, bioinformatics, and medicine.The QC-RLSC (quality control–based robust LOESS signal correction) algorithm is used for normalization. Dunn et al. (2011) <doi:10.1038/nprot.2011.335>.
License: MIT + file LICENSE
Imports: bs4Dash, config (>= 0.3.1), dplyr, DT, golem (>= 0.3.5),
        magrittr, readr, shiny (>= 1.7.2), tibble
Encoding: UTF-8
RoxygenNote: 7.2.3
Suggests: spelling, testthat (>= 3.0.0)
Config/testthat/edition: 3
URL: https://github.com/YaoxiangLi/omicsTools
BugReports: https://github.com/YaoxiangLi/omicsTools/issues
NeedsCompilation: no
Packaged: 2023-06-30 18:20:54 UTC; bach
Author: Yaoxiang Li [cre, aut] (<https://orcid.org/0000-0001-9200-1016>),
  Zihao Zhang [aut],
  Meth Jayatilake [aut],
  Amrita Cheema [aut] (<https://orcid.org/0000-0003-4877-7583>)
Maintainer: Yaoxiang Li <liyaoxiang@outlook.com>
Repository: CRAN
Date/Publication: 2023-07-03 16:20:02 UTC
Built: R 4.6.0; ; 2025-07-18 09:52:16 UTC; unix
