backnow_cm              Get Bayesian Back-calculation Estimates and
                        Model Diagnostics
convert_to_linelist     Convert Case Counts to a Line List
create_caseCounts       Create a Case Counts Data Frame
create_linelist         Create a Line List from Report and Onset Dates
dnb                     Calculate Log-Probability Density for Negative
                        Binomial Distribution
dummy                   Generate Dummy Variables Matrix for Weeks and
                        Weekends
findmiss                Locate Missing Values in a Numeric Vector
get_mu_vec              Calculate Exponential of Linear Combinations
getr                    Calculate Time-Varying Reproduction Number R(t)
lambda                  Calculate Lambda Values for Poisson
                        Distribution Mean
logLikNB                Compute Log-Likelihood for a Right-Truncated
                        Negative Binomial Model
plot.backnow            Plot Estimates or Reproduction Numbers
plot.caseCounts         Plot Case Counts Over Time
pnb                     Compute Cumulative Distribution Function for
                        Negative Binomial Distribution
prop                    Calculate Proportions of Event Counts Within a
                        Specified Time Range
rnb                     Generate Random Samples from a Negative
                        Binomial Distribution
run_backnow             Run Back Calculation and Estimate Reproduction
                        Numbers
sample_cases            Sample datasets
si                      Calculate Serial Interval Distribution for
                        COVID-19
