Ancestry_barchart       Plot an ancestry matrix for individuals and(or)
                        populations.
Dif_Stats_Map           *WARNING! This function has been deprecated and
                        is no longer supported. Please use the
                        Network_map function.* A function to map
                        differentiation statistics.
Dif_stats               *WARNING! This function has been deprecated and
                        is no longer supported. Please use the
                        Differentiation function.* A function to
                        calculate differentiation statistics and
                        perform significance testing with a vcf file.
Differentiation         A function to estimate three measures of
                        genetic differentiation using geno files, vcf
                        files, or vcfR objects. Data is assumed to be
                        bi-allelic.
Div_Stats_Map           *WARNING! This function has been deprecated and
                        is no longer supported. Please use the
                        Point_map function instead.* A function to map
                        diversity statistics.
Div_stats               *WARNING! This function has been deprecated and
                        is no longer supported. Please use the
                        Heterozygosity and Private.alleles functions.*
                        A function to estimate heterozygosity and the
                        number of private alleles from a vcf file.
Fst_dat                 A genetic differentiation matrix and locality
                        information for each population. This data was
                        generated by subsetting data of Farleigh et
                        al., 2021.
Het_dat                 A data frame of hypothetical heterozygosity
                        data produced by Div_Stats.
Heterozygosity          A function to estimate seven measures of
                        heterozygosity using geno files, vcf files, or
                        vcfR objects. Data is assumed to be bi-allelic.
HornedLizard_Pop        A population assignment data frame to be used
                        in 'Div_stats' and 'Dif_stats'.
HornedLizard_VCF        A vcfR object to be used in 'Div_stats' and
                        'Dif_stats'.
Network_map             A function to map statistics (i.e., genetic
                        differentiation) between points as a network on
                        a map.
PCA                     A function to perform principal component
                        analysis (PCA) on genetic data. Loci with
                        missing data will be removed prior to PCA.
Pairwise_heatmap        A function to plot a heatmap from a symmetric
                        matrix.
Piechart_map            Plot a map of ancestry pie charts.
Plot_ancestry           *WARNING! This function has been deprecated and
                        is no longer supported. Please use the
                        Ancestry_barchart and Piechart_map functions.*
                        Plot an ancestry matrix and map of ancestry pie
                        charts.
Plot_coordinates        A function to plot coordinates on a map.
Point_map               A function to map statistics as colored points
                        on a map.
Private.alleles         A function to estimate the number of private
                        alleles in each population.
Q_dat                   A list representing a q-matrix and the locality
                        information associated with the qmatrix
